Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 AL365203.3-201ENST00000609742 2057 ntBASIC11.94□□□□□ -0.5
UBE2D3P61077 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.94□□□□□ -0.5
UBE2D3P61077 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
UBE2D3P61077 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
UBE2D3P61077 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.94□□□□□ -0.5
UBE2D3P61077 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.94□□□□□ -0.5
UBE2D3P61077 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D3P61077 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D3P61077 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 AL391256.1-201ENST00000443260 1855 ntBASIC11.93□□□□□ -0.5
UBE2D3P61077 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 C8orf49-201ENST00000525043 1968 ntBASIC11.93□□□□□ -0.5
UBE2D3P61077 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 KRT16P4-201ENST00000453883 522 ntBASIC11.93□□□□□ -0.5
UBE2D3P61077 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.93□□□□□ -0.5
UBE2D3P61077 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UBE2D3P61077 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 LINC00895-201ENST00000629028 1637 ntBASIC11.93□□□□□ -0.5
UBE2D3P61077 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBE2D3P61077 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UBE2D3P61077 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.92□□□□□ -0.5
UBE2D3P61077 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.92□□□□□ -0.5
UBE2D3P61077 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.92□□□□□ -0.5
UBE2D3P61077 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
UBE2D3P61077 PRYP5-201ENST00000451909 266 ntBASIC11.92□□□□□ -0.5
UBE2D3P61077 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms