Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ACTBP60709 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.41□□□□□ -0.1
ACTBP60709 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 AL031133.1-201ENST00000406807 723 ntBASIC14.41□□□□□ -0.1
ACTBP60709 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 AL136038.3-201ENST00000561909 1096 ntBASIC14.41□□□□□ -0.1
ACTBP60709 RNF126P1-202ENST00000569893 925 ntBASIC14.41□□□□□ -0.1
ACTBP60709 AC087388.1-201ENST00000571370 1112 ntBASIC14.41□□□□□ -0.1
ACTBP60709 AL390719.2-201ENST00000606993 987 ntBASIC14.41□□□□□ -0.1
ACTBP60709 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.41□□□□□ -0.1
ACTBP60709 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 AL121956.5-201ENST00000625261 221 ntBASIC14.41□□□□□ -0.1
ACTBP60709 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 AC002310.6-201ENST00000624451 1377 ntBASIC14.41□□□□□ -0.1
ACTBP60709 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 AC009336.1-201ENST00000608941 1553 ntBASIC14.41□□□□□ -0.1
ACTBP60709 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.41□□□□□ -0.1
ACTBP60709 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.41□□□□□ -0.1
ACTBP60709 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ACTBP60709 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ACTBP60709 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.4□□□□□ -0.1
ACTBP60709 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 STK19B-204ENST00000512515 211 ntBASIC14.4□□□□□ -0.1
ACTBP60709 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.4□□□□□ -0.1
ACTBP60709 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
ACTBP60709 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.4□□□□□ -0.1
ACTBP60709 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ACTBP60709 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
ACTBP60709 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ACTBP60709 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
ACTBP60709 AC092850.2-201ENST00000623821 2697 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms