Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.1■□□□□ 0.65
CHMP4BP1P59074 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 REXO1L3P-201ENST00000622202 1288 ntBASIC19.1■□□□□ 0.65
CHMP4BP1P59074 AL513210.1-201ENST00000629608 234 ntBASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 PCDHA14-201ENST00000506751 2298 ntBASIC19.1■□□□□ 0.65
CHMP4BP1P59074 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 AGGF1P2-201ENST00000426656 2106 ntBASIC19.1■□□□□ 0.65
CHMP4BP1P59074 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP4BP1P59074 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 FAM8A3P-201ENST00000427218 844 ntBASIC19.09■□□□□ 0.65
CHMP4BP1P59074 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AC022145.2-201ENST00000598203 171 ntBASIC19.09■□□□□ 0.65
CHMP4BP1P59074 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CHMP4BP1P59074 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP4BP1P59074 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 MIR3197-201ENST00000582241 73 ntBASIC19.08■□□□□ 0.64
CHMP4BP1P59074 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP4BP1P59074 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP4BP1P59074 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP4BP1P59074 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP4BP1P59074 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP4BP1P59074 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms