Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN6P56747 RPL37AP1-201ENST00000412502 279 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN6P56747 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN6P56747 INE1-201ENST00000456273 945 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 AC105233.2-201ENST00000523697 349 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 AF228730.5-201ENST00000530288 346 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CLDN6P56747 WASH4P-201ENST00000564273 1246 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN6P56747 CYP2A7P1-201ENST00000595391 815 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 AC004790.1-201ENST00000612686 536 ntBASIC15.97■□□□□ 0.15
CLDN6P56747 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN6P56747 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN6P56747 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN6P56747 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN6P56747 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN6P56747 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLDN6P56747 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CLDN6P56747 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN6P56747 GPR53P-205ENST00000457298 1084 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 HLA-V-204ENST00000476601 1289 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN6P56747 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.96■□□□□ 0.15
CLDN6P56747 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLDN6P56747 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN6P56747 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
CLDN6P56747 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLDN6P56747 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CLDN6P56747 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.96■□□□□ 0.14
CLDN6P56747 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.95■□□□□ 0.14
CLDN6P56747 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
CLDN6P56747 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN6P56747 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN6P56747 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLDN6P56747 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLDN6P56747 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN6P56747 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN6P56747 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 LINC00895-201ENST00000629028 1637 ntBASIC15.95■□□□□ 0.14
CLDN6P56747 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLDN6P56747 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.95■□□□□ 0.14
CLDN6P56747 SLC25A1P3-201ENST00000395415 828 ntBASIC15.95■□□□□ 0.14
CLDN6P56747 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
CLDN6P56747 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN6P56747 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.95■□□□□ 0.14
CLDN6P56747 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN6P56747 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN6P56747 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms