Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.53■□□□□ 0.08
PER3P56645 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PER3P56645 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.53■□□□□ 0.08
PER3P56645 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PER3P56645 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.53■□□□□ 0.08
PER3P56645 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 AC002558.1-201ENST00000488906 803 ntBASIC15.53■□□□□ 0.08
PER3P56645 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.53■□□□□ 0.08
PER3P56645 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.53■□□□□ 0.08
PER3P56645 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PER3P56645 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
PER3P56645 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.53■□□□□ 0.08
PER3P56645 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PER3P56645 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PER3P56645 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.52■□□□□ 0.08
PER3P56645 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.52■□□□□ 0.08
PER3P56645 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PER3P56645 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 AP002414.1-201ENST00000391405 1147 ntBASIC15.52■□□□□ 0.08
PER3P56645 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 PAWRP1-201ENST00000451083 565 ntBASIC15.52■□□□□ 0.08
PER3P56645 AC067863.1-201ENST00000494933 530 ntBASIC15.52■□□□□ 0.08
PER3P56645 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.52■□□□□ 0.08
PER3P56645 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.52■□□□□ 0.08
PER3P56645 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.52■□□□□ 0.08
PER3P56645 STK25P1-201ENST00000585406 838 ntBASIC15.52■□□□□ 0.08
PER3P56645 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.52■□□□□ 0.08
PER3P56645 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.52■□□□□ 0.08
PER3P56645 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.52■□□□□ 0.08
PER3P56645 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PER3P56645 LINC02199-201ENST00000506655 2702 ntBASIC15.52■□□□□ 0.08
PER3P56645 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.52■□□□□ 0.07
PER3P56645 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PER3P56645 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.52■□□□□ 0.07
PER3P56645 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PER3P56645 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PER3P56645 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PER3P56645 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 AC097637.2-201ENST00000624096 1997 ntBASIC15.51■□□□□ 0.07
PER3P56645 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PER3P56645 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.51■□□□□ 0.07
PER3P56645 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PER3P56645 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms