Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 AC060834.1-201ENST00000443027 2032 ntBASIC12.42□□□□□ -0.42
CMC4P56277 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CMC4P56277 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.42□□□□□ -0.42
CMC4P56277 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CMC4P56277 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CMC4P56277 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 WASH6P-202ENST00000359512 1437 ntBASIC12.41□□□□□ -0.42
CMC4P56277 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 KRT18P13-201ENST00000400056 1290 ntBASIC12.41□□□□□ -0.42
CMC4P56277 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 UPF3AP3-201ENST00000420996 769 ntBASIC12.41□□□□□ -0.42
CMC4P56277 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 AL671277.1-201ENST00000429656 993 ntBASIC12.41□□□□□ -0.42
CMC4P56277 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 FAM58CP-201ENST00000435741 640 ntBASIC12.41□□□□□ -0.42
CMC4P56277 AP000347.1-202ENST00000435868 847 ntBASIC12.41□□□□□ -0.42
CMC4P56277 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 AC092865.5-201ENST00000545435 363 ntBASIC12.41□□□□□ -0.42
CMC4P56277 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
CMC4P56277 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 AL513190.1-201ENST00000621254 727 ntBASIC12.41□□□□□ -0.42
CMC4P56277 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 AC092865.6-201ENST00000642101 219 ntBASIC12.41□□□□□ -0.42
CMC4P56277 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.41□□□□□ -0.42
CMC4P56277 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CMC4P56277 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CMC4P56277 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CMC4P56277 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.41□□□□□ -0.42
CMC4P56277 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CMC4P56277 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CMC4P56277 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CMC4P56277 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CMC4P56277 AC105020.1-201ENST00000435356 2205 ntBASIC12.4□□□□□ -0.42
CMC4P56277 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.4□□□□□ -0.42
CMC4P56277 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 HTR5BP-201ENST00000430851 1154 ntBASIC12.4□□□□□ -0.42
CMC4P56277 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.4□□□□□ -0.42
CMC4P56277 RARRES2P8-201ENST00000566335 367 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms