Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDE1AP54750 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.34■□□□□ 0.85
PDE1AP54750 AC007064.4-201ENST00000637740 555 ntBASIC20.34■□□□□ 0.85
PDE1AP54750 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE1AP54750 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE1AP54750 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
PDE1AP54750 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 AC026691.1-201ENST00000602502 2017 ntBASIC20.34■□□□□ 0.85
PDE1AP54750 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE1AP54750 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.34■□□□□ 0.85
PDE1AP54750 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDE1AP54750 MTHFR-217ENST00000641820 1569 ntBASIC20.34■□□□□ 0.85
PDE1AP54750 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 BCAR1-209ENST00000546196 1340 ntBASIC20.33■□□□□ 0.85
PDE1AP54750 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDE1AP54750 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE1AP54750 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE1AP54750 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE1AP54750 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE1AP54750 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.33■□□□□ 0.85
PDE1AP54750 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
PDE1AP54750 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.33■□□□□ 0.84
PDE1AP54750 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 ZNF259P1-201ENST00000407656 1365 ntBASIC20.33■□□□□ 0.84
PDE1AP54750 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE1AP54750 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.33■□□□□ 0.84
PDE1AP54750 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDE1AP54750 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.32■□□□□ 0.84
PDE1AP54750 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 AC021097.1-201ENST00000607902 574 ntBASIC20.32■□□□□ 0.84
PDE1AP54750 AC020765.3-201ENST00000613051 740 ntBASIC20.32■□□□□ 0.84
PDE1AP54750 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE1AP54750 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE1AP54750 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
PDE1AP54750 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms