Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC025048.3-201ENST00000590609 569 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CLTCL1P53675 AC026979.3-201ENST00000607315 403 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 AC099568.2-201ENST00000609194 695 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.51■■□□□ 1.35
CLTCL1P53675 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 AC005702.4-201ENST00000618393 416 ntBASIC23.51■■□□□ 1.35
CLTCL1P53675 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLTCL1P53675 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC23.5■■□□□ 1.35
CLTCL1P53675 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC23.5■■□□□ 1.35
CLTCL1P53675 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 AP006294.1-201ENST00000415407 339 ntBASIC23.5■■□□□ 1.35
CLTCL1P53675 AL353779.1-201ENST00000434793 351 ntBASIC23.5■■□□□ 1.35
CLTCL1P53675 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.5■■□□□ 1.35
CLTCL1P53675 INE1-201ENST00000456273 945 ntBASIC23.5■■□□□ 1.35
CLTCL1P53675 RN7SL837P-201ENST00000463010 287 ntBASIC23.5■■□□□ 1.35
CLTCL1P53675 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC23.5■■□□□ 1.35
CLTCL1P53675 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
CLTCL1P53675 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.5■■□□□ 1.35
CLTCL1P53675 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CLTCL1P53675 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CLTCL1P53675 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
CLTCL1P53675 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CLTCL1P53675 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC23.49■■□□□ 1.35
CLTCL1P53675 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CLTCL1P53675 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC23.49■■□□□ 1.35
CLTCL1P53675 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC23.49■■□□□ 1.35
CLTCL1P53675 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CLTCL1P53675 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC23.49■■□□□ 1.35
CLTCL1P53675 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CLTCL1P53675 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC23.49■■□□□ 1.35
CLTCL1P53675 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.48■■□□□ 1.35
CLTCL1P53675 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.48■■□□□ 1.35
CLTCL1P53675 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.48■■□□□ 1.35
CLTCL1P53675 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.48■■□□□ 1.35
CLTCL1P53675 AC105020.1-201ENST00000435356 2205 ntBASIC23.48■■□□□ 1.35
CLTCL1P53675 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC23.48■■□□□ 1.35
CLTCL1P53675 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC23.48■■□□□ 1.35
CLTCL1P53675 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CLTCL1P53675 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLTCL1P53675 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC23.48■■□□□ 1.35
CLTCL1P53675 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC23.48■■□□□ 1.35
CLTCL1P53675 IGHV3-71-201ENST00000523324 359 ntBASIC23.48■■□□□ 1.35
CLTCL1P53675 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CLTCL1P53675 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.47■■□□□ 1.35
CLTCL1P53675 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC23.47■■□□□ 1.35
CLTCL1P53675 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC23.47■■□□□ 1.35
CLTCL1P53675 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CLTCL1P53675 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.47■■□□□ 1.35
CLTCL1P53675 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC23.47■■□□□ 1.35
CLTCL1P53675 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.47■■□□□ 1.35
CLTCL1P53675 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLTCL1P53675 TPRX2P-201ENST00000535362 881 ntBASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms