Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 MIR943-201ENST00000401286 94 ntBASIC16.2■□□□□ 0.18
PDX1P52945 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.2■□□□□ 0.18
PDX1P52945 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 UGT1A2P-201ENST00000454886 866 ntBASIC16.2■□□□□ 0.18
PDX1P52945 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 AC125807.1-201ENST00000483097 614 ntBASIC16.2■□□□□ 0.18
PDX1P52945 INGX-202ENST00000489074 768 ntBASIC16.2■□□□□ 0.18
PDX1P52945 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.2■□□□□ 0.18
PDX1P52945 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.2■□□□□ 0.18
PDX1P52945 AC026150.2-201ENST00000564693 1156 ntBASIC16.2■□□□□ 0.18
PDX1P52945 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.2■□□□□ 0.18
PDX1P52945 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.2■□□□□ 0.18
PDX1P52945 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDX1P52945 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PDX1P52945 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PDX1P52945 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDX1P52945 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 AC008677.1-201ENST00000519230 1561 ntBASIC16.19■□□□□ 0.18
PDX1P52945 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.19■□□□□ 0.18
PDX1P52945 AC107890.1-201ENST00000422478 521 ntBASIC16.19■□□□□ 0.18
PDX1P52945 BASP1P1-201ENST00000430708 665 ntBASIC16.19■□□□□ 0.18
PDX1P52945 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PDX1P52945 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.19■□□□□ 0.18
PDX1P52945 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.19■□□□□ 0.18
PDX1P52945 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDX1P52945 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDX1P52945 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.19■□□□□ 0.18
PDX1P52945 AD000864.1-201ENST00000624076 2295 ntBASIC16.19■□□□□ 0.18
PDX1P52945 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 FO538757.1-201ENST00000623083 1397 ntBASIC16.18■□□□□ 0.18
PDX1P52945 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDX1P52945 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PDX1P52945 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDX1P52945 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.18■□□□□ 0.18
PDX1P52945 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.18■□□□□ 0.18
PDX1P52945 AC236430.1-201ENST00000402231 743 ntBASIC16.18■□□□□ 0.18
PDX1P52945 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.18■□□□□ 0.18
PDX1P52945 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.18■□□□□ 0.18
PDX1P52945 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.18■□□□□ 0.18
PDX1P52945 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms