Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GPC3P51654 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GPC3P51654 UXT-AS1-201ENST00000590504 1525 ntBASIC18.39■□□□□ 0.53
GPC3P51654 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GPC3P51654 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC3P51654 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.38■□□□□ 0.53
GPC3P51654 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
GPC3P51654 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.38■□□□□ 0.53
GPC3P51654 AC015911.4-201ENST00000588022 1070 ntBASIC18.38■□□□□ 0.53
GPC3P51654 AC013467.2-201ENST00000605472 835 ntBASIC18.38■□□□□ 0.53
GPC3P51654 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 AC021097.1-201ENST00000607902 574 ntBASIC18.38■□□□□ 0.53
GPC3P51654 AC093512.1-201ENST00000617969 520 ntBASIC18.38■□□□□ 0.53
GPC3P51654 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC3P51654 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
GPC3P51654 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 AGGF1P2-201ENST00000426656 2106 ntBASIC18.38■□□□□ 0.53
GPC3P51654 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC3P51654 AC006277.1-201ENST00000624348 1610 ntBASIC18.38■□□□□ 0.53
GPC3P51654 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC3P51654 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 AC011676.5-201ENST00000624864 2660 ntBASIC18.37■□□□□ 0.53
GPC3P51654 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC3P51654 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC3P51654 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.37■□□□□ 0.53
GPC3P51654 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.37■□□□□ 0.53
GPC3P51654 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.37■□□□□ 0.53
GPC3P51654 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.37■□□□□ 0.53
GPC3P51654 AC008267.7-201ENST00000624570 1194 ntBASIC18.37■□□□□ 0.53
GPC3P51654 Z92544.3-201ENST00000624747 417 ntBASIC18.37■□□□□ 0.53
GPC3P51654 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
GPC3P51654 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC3P51654 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
GPC3P51654 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
GPC3P51654 PCDHB17P-201ENST00000539533 2393 ntBASIC18.37■□□□□ 0.53
GPC3P51654 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.36■□□□□ 0.53
GPC3P51654 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GPC3P51654 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 MIR770-201ENST00000390219 98 ntBASIC18.36■□□□□ 0.53
GPC3P51654 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 RBPMS2P1-201ENST00000437762 623 ntBASIC18.36■□□□□ 0.53
GPC3P51654 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GPC3P51654 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 AL512356.2-201ENST00000546955 174 ntBASIC18.36■□□□□ 0.53
GPC3P51654 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.36■□□□□ 0.53
GPC3P51654 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms