Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 AC026396.1-201ENST00000419388 421 ntBASIC14.88□□□□□ -0.03
CSNK1A1P48729 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 FAM185BP-201ENST00000443595 716 ntBASIC14.88□□□□□ -0.03
CSNK1A1P48729 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.88□□□□□ -0.03
CSNK1A1P48729 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSNK1A1P48729 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.88□□□□□ -0.03
CSNK1A1P48729 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 PKD1P5-201ENST00000532415 10291 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC092171.3-201ENST00000610122 2651 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC104109.2-201ENST00000602919 1418 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AL590627.1-203ENST00000421194 1026 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 ACTL9-202ENST00000612068 1252 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 IL9RP2-201ENST00000423948 1312 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.87□□□□□ -0.03
CSNK1A1P48729 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSNK1A1P48729 AC012569.1-201ENST00000591191 1524 ntBASIC14.87□□□□□ -0.03
CSNK1A1P48729 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.86□□□□□ -0.03
CSNK1A1P48729 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CSNK1A1P48729 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.86□□□□□ -0.03
CSNK1A1P48729 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSNK1A1P48729 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.86□□□□□ -0.03
CSNK1A1P48729 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms