Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 UNC93B7-201ENST00000509439 705 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 AC105339.3-201ENST00000560043 636 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 OR7E47P-204ENST00000575924 449 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 MIR1199-201ENST00000621445 119 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN7P35236 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN7P35236 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.25■□□□□ 0.35
PTPN7P35236 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN7P35236 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
PTPN7P35236 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN7P35236 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTPN7P35236 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN7P35236 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN7P35236 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PTPN7P35236 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN7P35236 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN7P35236 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN7P35236 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 HNRNPDP1-201ENST00000439535 754 ntBASIC17.23■□□□□ 0.35
PTPN7P35236 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN7P35236 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPN7P35236 AL121912.1-201ENST00000603683 238 ntBASIC17.23■□□□□ 0.35
PTPN7P35236 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.23■□□□□ 0.35
PTPN7P35236 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN7P35236 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 LINC02199-201ENST00000506655 2702 ntBASIC17.23■□□□□ 0.35
PTPN7P35236 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 AL603832.2-201ENST00000566195 2125 ntBASIC17.23■□□□□ 0.35
PTPN7P35236 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPN7P35236 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN7P35236 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms