Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.52■□□□□ 0.56
CTGFP29279 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.52■□□□□ 0.56
CTGFP29279 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CTGFP29279 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 MIR5189-201ENST00000577370 114 ntBASIC18.52■□□□□ 0.56
CTGFP29279 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.52■□□□□ 0.56
CTGFP29279 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTGFP29279 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CTGFP29279 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
CTGFP29279 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTGFP29279 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTGFP29279 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTGFP29279 AL512652.2-201ENST00000625156 1716 ntBASIC18.52■□□□□ 0.55
CTGFP29279 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTGFP29279 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 TUBB8P12-201ENST00000308911 1335 ntBASIC18.51■□□□□ 0.55
CTGFP29279 TUBB7P-202ENST00000428444 1305 ntBASIC18.51■□□□□ 0.55
CTGFP29279 TUBB8P7-204ENST00000567960 1332 ntBASIC18.51■□□□□ 0.55
CTGFP29279 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTGFP29279 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.51■□□□□ 0.55
CTGFP29279 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.51■□□□□ 0.55
CTGFP29279 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.51■□□□□ 0.55
CTGFP29279 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CTGFP29279 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.51■□□□□ 0.55
CTGFP29279 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 AC005229.1-201ENST00000392885 409 ntBASIC18.51■□□□□ 0.55
CTGFP29279 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.51■□□□□ 0.55
CTGFP29279 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.51■□□□□ 0.55
CTGFP29279 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.51■□□□□ 0.55
CTGFP29279 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.51■□□□□ 0.55
CTGFP29279 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.51■□□□□ 0.55
CTGFP29279 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.51■□□□□ 0.55
CTGFP29279 AC124947.2-201ENST00000547118 1133 ntBASIC18.51■□□□□ 0.55
CTGFP29279 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.51■□□□□ 0.55
CTGFP29279 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.51■□□□□ 0.55
CTGFP29279 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTGFP29279 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.5■□□□□ 0.55
CTGFP29279 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.5■□□□□ 0.55
CTGFP29279 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.5■□□□□ 0.55
CTGFP29279 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.5■□□□□ 0.55
CTGFP29279 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
CTGFP29279 AL138688.1-201ENST00000624851 1594 ntBASIC18.5■□□□□ 0.55
CTGFP29279 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTGFP29279 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.5■□□□□ 0.55
CTGFP29279 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.49■□□□□ 0.55
CTGFP29279 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 AC092068.3-201ENST00000587894 2016 ntBASIC18.49■□□□□ 0.55
CTGFP29279 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTGFP29279 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 BRWD1P1-201ENST00000401091 371 ntBASIC18.49■□□□□ 0.55
CTGFP29279 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.49■□□□□ 0.55
CTGFP29279 AL139010.1-201ENST00000454878 894 ntBASIC18.49■□□□□ 0.55
CTGFP29279 RN7SL399P-201ENST00000471648 279 ntBASIC18.49■□□□□ 0.55
CTGFP29279 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTGFP29279 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.49■□□□□ 0.55
CTGFP29279 AC104596.2-201ENST00000512793 793 ntBASIC18.49■□□□□ 0.55
CTGFP29279 RNA5SP412-201ENST00000516234 123 ntBASIC18.49■□□□□ 0.55
CTGFP29279 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.49■□□□□ 0.55
CTGFP29279 TIMM17BP1-201ENST00000545713 516 ntBASIC18.49■□□□□ 0.55
CTGFP29279 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms