Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 KRT18P27-201ENST00000427733 1299 ntBASIC15.67■□□□□ 0.1
CHMP24386 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP24386 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP24386 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 AC012640.2-201ENST00000561606 901 ntBASIC15.67■□□□□ 0.1
CHMP24386 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP24386 MIR1199-201ENST00000621445 119 ntBASIC15.67■□□□□ 0.1
CHMP24386 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 AC097637.2-201ENST00000624096 1997 ntBASIC15.67■□□□□ 0.1
CHMP24386 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
CHMP24386 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.66■□□□□ 0.1
CHMP24386 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.66■□□□□ 0.1
CHMP24386 AL139424.1-201ENST00000607572 797 ntBASIC15.66■□□□□ 0.1
CHMP24386 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP24386 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHMP24386 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP24386 AC132872.4-202ENST00000622924 2756 ntBASIC15.65■□□□□ 0.1
CHMP24386 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHMP24386 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 AC092910.1-201ENST00000482027 1129 ntBASIC15.65■□□□□ 0.1
CHMP24386 AC136632.2-201ENST00000512891 861 ntBASIC15.65■□□□□ 0.1
CHMP24386 IGHV3-22-201ENST00000520721 359 ntBASIC15.65■□□□□ 0.1
CHMP24386 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP24386 AL356488.2-201ENST00000602755 427 ntBASIC15.65■□□□□ 0.1
CHMP24386 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.65■□□□□ 0.1
CHMP24386 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 AL645728.1-201ENST00000366221 2101 ntBASIC15.65■□□□□ 0.1
CHMP24386 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHMP24386 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP24386 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms