Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BCKDHBP21953 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BCKDHBP21953 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BCKDHBP21953 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
BCKDHBP21953 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
BCKDHBP21953 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.37■□□□□ 0.21
BCKDHBP21953 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.37■□□□□ 0.21
BCKDHBP21953 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.37■□□□□ 0.21
BCKDHBP21953 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BCKDHBP21953 AL391825.1-201ENST00000457671 1364 ntBASIC16.37■□□□□ 0.21
BCKDHBP21953 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.37■□□□□ 0.21
BCKDHBP21953 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.36■□□□□ 0.21
BCKDHBP21953 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.36■□□□□ 0.21
BCKDHBP21953 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 AL138688.1-201ENST00000624851 1594 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 AC112492.5-201ENST00000421897 457 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 AC093004.1-201ENST00000508850 424 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.36■□□□□ 0.21
BCKDHBP21953 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.36■□□□□ 0.21
BCKDHBP21953 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.36■□□□□ 0.21
BCKDHBP21953 AL162274.1-201ENST00000617191 1098 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 MIR6799-201ENST00000620297 69 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
BCKDHBP21953 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
BCKDHBP21953 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 AC008764.6-201ENST00000595909 2069 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BCKDHBP21953 AL390961.4-201ENST00000623958 2535 ntBASIC16.36■□□□□ 0.21
BCKDHBP21953 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.36■□□□□ 0.21
BCKDHBP21953 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC006277.1-201ENST00000624348 1610 ntBASIC16.35■□□□□ 0.21
BCKDHBP21953 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.35■□□□□ 0.21
BCKDHBP21953 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.35■□□□□ 0.21
BCKDHBP21953 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.35■□□□□ 0.21
BCKDHBP21953 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.35■□□□□ 0.21
BCKDHBP21953 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
BCKDHBP21953 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
BCKDHBP21953 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 AC018470.1-201ENST00000624790 3129 ntBASIC16.35■□□□□ 0.21
BCKDHBP21953 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.35■□□□□ 0.21
BCKDHBP21953 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BCKDHBP21953 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms