Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 AC006277.1-201ENST00000624348 1610 ntBASIC16.17■□□□□ 0.18
POLR2CP19387 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 AL355306.1-201ENST00000415580 579 ntBASIC16.17■□□□□ 0.18
POLR2CP19387 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR2CP19387 TIMM8BP1-201ENST00000452384 211 ntBASIC16.17■□□□□ 0.18
POLR2CP19387 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.17■□□□□ 0.18
POLR2CP19387 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.17■□□□□ 0.18
POLR2CP19387 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
POLR2CP19387 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR2CP19387 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
POLR2CP19387 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.17■□□□□ 0.18
POLR2CP19387 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
POLR2CP19387 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR2CP19387 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR2CP19387 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2CP19387 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
POLR2CP19387 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.16■□□□□ 0.18
POLR2CP19387 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
POLR2CP19387 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.16■□□□□ 0.18
POLR2CP19387 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
POLR2CP19387 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.16■□□□□ 0.18
POLR2CP19387 AL161645.1-201ENST00000622716 1255 ntBASIC16.16■□□□□ 0.18
POLR2CP19387 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 CROCCP1-201ENST00000426910 5675 ntBASIC16.16■□□□□ 0.18
POLR2CP19387 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
POLR2CP19387 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2CP19387 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
POLR2CP19387 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
POLR2CP19387 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.16■□□□□ 0.18
POLR2CP19387 AC103702.1-201ENST00000548801 2630 ntBASIC16.15■□□□□ 0.18
POLR2CP19387 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
POLR2CP19387 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
POLR2CP19387 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR2CP19387 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 TFAMP1-201ENST00000412727 736 ntBASIC16.15■□□□□ 0.18
POLR2CP19387 AC092474.2-201ENST00000424288 719 ntBASIC16.15■□□□□ 0.18
POLR2CP19387 AL391256.1-201ENST00000443260 1855 ntBASIC16.15■□□□□ 0.18
POLR2CP19387 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
POLR2CP19387 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.15■□□□□ 0.18
POLR2CP19387 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
POLR2CP19387 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2CP19387 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.15■□□□□ 0.18
POLR2CP19387 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
POLR2CP19387 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.15■□□□□ 0.18
POLR2CP19387 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms