Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATF1P18846 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ATF1P18846 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATF1P18846 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.71□□□□□ -0.06
ATF1P18846 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.71□□□□□ -0.06
ATF1P18846 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATF1P18846 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATF1P18846 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
ATF1P18846 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATF1P18846 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATF1P18846 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.7□□□□□ -0.06
ATF1P18846 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATF1P18846 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ATF1P18846 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.7□□□□□ -0.06
ATF1P18846 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 SPDYE21P-201ENST00000413323 827 ntBASIC14.7□□□□□ -0.06
ATF1P18846 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 AC104819.1-201ENST00000504587 486 ntBASIC14.7□□□□□ -0.06
ATF1P18846 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.7□□□□□ -0.06
ATF1P18846 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.7□□□□□ -0.06
ATF1P18846 AL590326.2-201ENST00000625139 305 ntBASIC14.7□□□□□ -0.06
ATF1P18846 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATF1P18846 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.7□□□□□ -0.06
ATF1P18846 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
ATF1P18846 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ATF1P18846 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 AC097637.2-201ENST00000624096 1997 ntBASIC14.69□□□□□ -0.06
ATF1P18846 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.69□□□□□ -0.06
ATF1P18846 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
ATF1P18846 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.69□□□□□ -0.06
ATF1P18846 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.69□□□□□ -0.06
ATF1P18846 AP000867.3-201ENST00000524675 377 ntBASIC14.69□□□□□ -0.06
ATF1P18846 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.69□□□□□ -0.06
ATF1P18846 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.69□□□□□ -0.06
ATF1P18846 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.69□□□□□ -0.06
ATF1P18846 AC092329.2-201ENST00000598402 547 ntBASIC14.69□□□□□ -0.06
ATF1P18846 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.69□□□□□ -0.06
ATF1P18846 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ATF1P18846 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ATF1P18846 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ATF1P18846 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATF1P18846 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATF1P18846 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATF1P18846 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms