Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC130P13994 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC130P13994 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC130P13994 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC130P13994 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC130P13994 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC130P13994 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 HLA-A-202ENST00000376806 1854 ntBASIC17.66■□□□□ 0.42
CCDC130P13994 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC130P13994 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC130P13994 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC130P13994 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC130P13994 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC130P13994 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC130P13994 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC130P13994 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC130P13994 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 NKILA-202ENST00000614771 2598 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC130P13994 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC130P13994 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC130P13994 TIMM8BP1-201ENST00000452384 211 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC130P13994 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC130P13994 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 RARRES2P8-201ENST00000566335 367 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 AC021097.1-201ENST00000607902 574 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 AL596442.2-201ENST00000610240 980 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC130P13994 AL161645.1-201ENST00000622716 1255 ntBASIC17.65■□□□□ 0.42
CCDC130P13994 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC130P13994 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC130P13994 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC130P13994 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC130P13994 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC130P13994 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC130P13994 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.64■□□□□ 0.42
CCDC130P13994 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC130P13994 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC130P13994 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC130P13994 DNAJB3-202ENST00000449667 1266 ntBASIC17.64■□□□□ 0.41
CCDC130P13994 KRT8P48-201ENST00000515599 1220 ntBASIC17.64■□□□□ 0.41
CCDC130P13994 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC130P13994 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC130P13994 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 AL135744.1-201ENST00000565098 629 ntBASIC17.64■□□□□ 0.41
CCDC130P13994 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC130P13994 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC130P13994 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC130P13994 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC130P13994 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC130P13994 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms