Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC069262.1-201ENST00000539058 672 ntBASIC13.05□□□□□ -0.32
CD28P10747 LINC01225-203ENST00000563550 1244 ntBASIC13.05□□□□□ -0.32
CD28P10747 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.05□□□□□ -0.32
CD28P10747 AC015911.4-201ENST00000588022 1070 ntBASIC13.05□□□□□ -0.32
CD28P10747 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 AL390955.2-201ENST00000603032 514 ntBASIC13.05□□□□□ -0.32
CD28P10747 AP001059.3-201ENST00000619053 235 ntBASIC13.05□□□□□ -0.32
CD28P10747 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.05□□□□□ -0.32
CD28P10747 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CD28P10747 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 AL021920.2-201ENST00000624828 1351 ntBASIC13.05□□□□□ -0.32
CD28P10747 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
CD28P10747 AC131009.4-201ENST00000624048 1740 ntBASIC13.05□□□□□ -0.32
CD28P10747 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.05□□□□□ -0.32
CD28P10747 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD28P10747 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 FRMD8P1-201ENST00000440433 1524 ntBASIC13.04□□□□□ -0.32
CD28P10747 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD28P10747 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 AL138688.1-201ENST00000624851 1594 ntBASIC13.04□□□□□ -0.32
CD28P10747 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 MIR943-201ENST00000401286 94 ntBASIC13.04□□□□□ -0.32
CD28P10747 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.04□□□□□ -0.32
CD28P10747 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 SLC25A39P2-201ENST00000537614 270 ntBASIC13.04□□□□□ -0.32
CD28P10747 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 KRT8P23-201ENST00000560090 1207 ntBASIC13.04□□□□□ -0.32
CD28P10747 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 AC026150.2-201ENST00000564693 1156 ntBASIC13.04□□□□□ -0.32
CD28P10747 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.04□□□□□ -0.32
CD28P10747 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.04□□□□□ -0.32
CD28P10747 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.04□□□□□ -0.32
CD28P10747 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD28P10747 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.04□□□□□ -0.32
CD28P10747 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD28P10747 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.04□□□□□ -0.32
CD28P10747 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 LINC00896-202ENST00000609602 2128 ntBASIC13.03□□□□□ -0.32
CD28P10747 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.03□□□□□ -0.32
CD28P10747 AC016027.1-202ENST00000607927 1699 ntBASIC13.03□□□□□ -0.32
CD28P10747 AC116353.5-201ENST00000638148 1699 ntBASIC13.03□□□□□ -0.32
CD28P10747 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD28P10747 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD28P10747 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms