Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.27■□□□□ 0.52
CLTAP09496 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLTAP09496 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLTAP09496 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CLTAP09496 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLTAP09496 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CLTAP09496 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.26■□□□□ 0.51
CLTAP09496 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 AC002056.1-201ENST00000395613 760 ntBASIC18.26■□□□□ 0.51
CLTAP09496 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.26■□□□□ 0.51
CLTAP09496 ACTG1P14-201ENST00000446382 1122 ntBASIC18.26■□□□□ 0.51
CLTAP09496 AC112191.1-201ENST00000523689 701 ntBASIC18.26■□□□□ 0.51
CLTAP09496 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CLTAP09496 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.26■□□□□ 0.51
CLTAP09496 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 AC013467.2-201ENST00000605472 835 ntBASIC18.26■□□□□ 0.51
CLTAP09496 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.26■□□□□ 0.51
CLTAP09496 AC055717.3-201ENST00000622967 595 ntBASIC18.26■□□□□ 0.51
CLTAP09496 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLTAP09496 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 PCDH8P1-201ENST00000428983 2773 ntBASIC18.26■□□□□ 0.51
CLTAP09496 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 PCDHB17P-201ENST00000539533 2393 ntBASIC18.26■□□□□ 0.51
CLTAP09496 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLTAP09496 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLTAP09496 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 AP002490.2-201ENST00000524791 560 ntBASIC18.25■□□□□ 0.51
CLTAP09496 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 AC092902.6-201ENST00000641783 218 ntBASIC18.25■□□□□ 0.51
CLTAP09496 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 ELL2P1-201ENST00000413990 1906 ntBASIC18.25■□□□□ 0.51
CLTAP09496 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.25■□□□□ 0.51
CLTAP09496 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.25■□□□□ 0.51
CLTAP09496 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLTAP09496 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CLTAP09496 AC006277.1-201ENST00000624348 1610 ntBASIC18.24■□□□□ 0.51
CLTAP09496 LINC00895-201ENST00000629028 1637 ntBASIC18.24■□□□□ 0.51
CLTAP09496 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.24■□□□□ 0.51
CLTAP09496 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.24■□□□□ 0.51
CLTAP09496 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.24■□□□□ 0.51
CLTAP09496 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.24■□□□□ 0.51
CLTAP09496 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.24■□□□□ 0.51
CLTAP09496 MIR4469-201ENST00000583919 79 ntBASIC18.24■□□□□ 0.51
CLTAP09496 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
CLTAP09496 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.24■□□□□ 0.51
CLTAP09496 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms