Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.04□□□□□ -0.16
GAPDHP04406 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
GAPDHP04406 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GAPDHP04406 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
GAPDHP04406 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
GAPDHP04406 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.04□□□□□ -0.16
GAPDHP04406 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GAPDHP04406 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GAPDHP04406 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GAPDHP04406 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 AL136379.1-201ENST00000623471 2642 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GAPDHP04406 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.03□□□□□ -0.16
GAPDHP04406 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.03□□□□□ -0.16
GAPDHP04406 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.03□□□□□ -0.16
GAPDHP04406 SAPCD2P3-201ENST00000455031 850 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.03□□□□□ -0.16
GAPDHP04406 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 AC008608.2-201ENST00000606089 416 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 REXO1L6P-202ENST00000619970 1078 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 AL355877.3-201ENST00000622820 899 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.03□□□□□ -0.16
GAPDHP04406 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.03□□□□□ -0.16
GAPDHP04406 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GAPDHP04406 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GAPDHP04406 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GAPDHP04406 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 AC092364.2-201ENST00000596710 2692 ntBASIC14.02□□□□□ -0.16
GAPDHP04406 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
GAPDHP04406 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.02□□□□□ -0.16
GAPDHP04406 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GAPDHP04406 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GAPDHP04406 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
GAPDHP04406 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GAPDHP04406 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.02□□□□□ -0.16
GAPDHP04406 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 ACTG1P4-201ENST00000425123 1122 ntBASIC14.02□□□□□ -0.17
GAPDHP04406 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GAPDHP04406 IFNL4P1-201ENST00000607083 540 ntBASIC14.02□□□□□ -0.17
GAPDHP04406 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 AL022326.1-202ENST00000641533 845 ntBASIC14.02□□□□□ -0.17
GAPDHP04406 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GAPDHP04406 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.02□□□□□ -0.17
GAPDHP04406 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms