Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.21■□□□□ 0.51
VTNP04004 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VTNP04004 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
VTNP04004 BASP1P1-201ENST00000430708 665 ntBASIC18.21■□□□□ 0.51
VTNP04004 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.21■□□□□ 0.51
VTNP04004 INGX-202ENST00000489074 768 ntBASIC18.21■□□□□ 0.51
VTNP04004 AC097493.3-201ENST00000509725 367 ntBASIC18.21■□□□□ 0.51
VTNP04004 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.21■□□□□ 0.51
VTNP04004 MIR4745-201ENST00000577608 62 ntBASIC18.21■□□□□ 0.51
VTNP04004 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.21■□□□□ 0.51
VTNP04004 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 AC003101.2-201ENST00000612557 442 ntBASIC18.21■□□□□ 0.51
VTNP04004 AC018529.1-201ENST00000613063 361 ntBASIC18.21■□□□□ 0.51
VTNP04004 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.21■□□□□ 0.51
VTNP04004 AC005915.1-201ENST00000624912 2018 ntBASIC18.21■□□□□ 0.51
VTNP04004 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VTNP04004 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VTNP04004 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VTNP04004 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.21■□□□□ 0.5
VTNP04004 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.2■□□□□ 0.5
VTNP04004 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.2■□□□□ 0.5
VTNP04004 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 AL603756.1-201ENST00000606511 2163 ntBASIC18.2■□□□□ 0.5
VTNP04004 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.2■□□□□ 0.5
VTNP04004 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VTNP04004 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 AP002490.2-201ENST00000524791 560 ntBASIC18.2■□□□□ 0.5
VTNP04004 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.2■□□□□ 0.5
VTNP04004 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 AJ011932.1-201ENST00000621707 465 ntBASIC18.2■□□□□ 0.5
VTNP04004 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
VTNP04004 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.2■□□□□ 0.5
VTNP04004 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.2■□□□□ 0.5
VTNP04004 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTNP04004 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.19■□□□□ 0.5
VTNP04004 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTNP04004 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTNP04004 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTNP04004 AC092580.3-201ENST00000430932 139 ntBASIC18.19■□□□□ 0.5
VTNP04004 UGT1A2P-201ENST00000454886 866 ntBASIC18.19■□□□□ 0.5
VTNP04004 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.19■□□□□ 0.5
VTNP04004 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 AL158211.3-201ENST00000607385 239 ntBASIC18.19■□□□□ 0.5
VTNP04004 SPTSSB-204ENST00000617024 1292 ntBASIC18.19■□□□□ 0.5
VTNP04004 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 AL139011.1-202ENST00000642063 584 ntBASIC18.19■□□□□ 0.5
VTNP04004 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTNP04004 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTNP04004 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VTNP04004 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTNP04004 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
VTNP04004 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTNP04004 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms