Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 DNAJB3-201ENST00000446806 729 ntBASIC17.5■□□□□ 0.39
APOEP02649 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.5■□□□□ 0.39
APOEP02649 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.5■□□□□ 0.39
APOEP02649 AP002490.2-201ENST00000524791 560 ntBASIC17.5■□□□□ 0.39
APOEP02649 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.5■□□□□ 0.39
APOEP02649 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.5■□□□□ 0.39
APOEP02649 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 AL031432.2-201ENST00000566714 459 ntBASIC17.5■□□□□ 0.39
APOEP02649 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.5■□□□□ 0.39
APOEP02649 AL928711.1-201ENST00000570165 459 ntBASIC17.5■□□□□ 0.39
APOEP02649 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
APOEP02649 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 AC012569.1-201ENST00000591191 1524 ntBASIC17.5■□□□□ 0.39
APOEP02649 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
APOEP02649 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 AC131009.4-201ENST00000624048 1740 ntBASIC17.5■□□□□ 0.39
APOEP02649 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 AC074386.1-202ENST00000463561 864 ntBASIC17.49■□□□□ 0.39
APOEP02649 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 AC087641.1-201ENST00000557561 1021 ntBASIC17.49■□□□□ 0.39
APOEP02649 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 MTDHP5-201ENST00000598980 586 ntBASIC17.49■□□□□ 0.39
APOEP02649 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 AC023511.2-201ENST00000618803 211 ntBASIC17.49■□□□□ 0.39
APOEP02649 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.49■□□□□ 0.39
APOEP02649 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
APOEP02649 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APOEP02649 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
APOEP02649 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.48■□□□□ 0.39
APOEP02649 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
APOEP02649 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
APOEP02649 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
APOEP02649 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.48■□□□□ 0.39
APOEP02649 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
APOEP02649 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
APOEP02649 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 YBX2P1-201ENST00000394192 760 ntBASIC17.48■□□□□ 0.39
APOEP02649 KRT18P13-201ENST00000400056 1290 ntBASIC17.48■□□□□ 0.39
APOEP02649 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.48■□□□□ 0.39
APOEP02649 MCCD1P2-201ENST00000423228 335 ntBASIC17.48■□□□□ 0.39
APOEP02649 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.48■□□□□ 0.39
APOEP02649 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
APOEP02649 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.48■□□□□ 0.39
APOEP02649 AC068137.2-201ENST00000605408 478 ntBASIC17.48■□□□□ 0.39
APOEP02649 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms