Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.11■□□□□ 0.33
MT-CO1P00395 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.11■□□□□ 0.33
MT-CO1P00395 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.11■□□□□ 0.33
MT-CO1P00395 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 HCG4-201ENST00000418983 998 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.1■□□□□ 0.33
MT-CO1P00395 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.1■□□□□ 0.33
MT-CO1P00395 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 DNAJB3-202ENST00000449667 1266 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.1■□□□□ 0.33
MT-CO1P00395 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.1■□□□□ 0.33
MT-CO1P00395 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AC087641.1-201ENST00000557561 1021 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.1■□□□□ 0.33
MT-CO1P00395 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 TUBB8P12-201ENST00000308911 1335 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MT-CO1P00395 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 TUBB7P-202ENST00000428444 1305 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 TUBB8P7-204ENST00000567960 1332 ntBASIC17.1■□□□□ 0.33
MT-CO1P00395 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-CO1P00395 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.1■□□□□ 0.33
MT-CO1P00395 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-CO1P00395 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-CO1P00395 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
MT-CO1P00395 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MT-CO1P00395 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MT-CO1P00395 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MT-CO1P00395 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MT-CO1P00395 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-CO1P00395 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-CO1P00395 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-CO1P00395 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
MT-CO1P00395 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
MT-CO1P00395 CYP2A7P1-201ENST00000595391 815 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms