Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TOMM40O96008 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TOMM40O96008 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.13□□□□□ -0.31
TOMM40O96008 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.13□□□□□ -0.31
TOMM40O96008 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 AC138894.3-201ENST00000603787 634 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 AC013467.2-201ENST00000605472 835 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 AP001269.4-201ENST00000609611 512 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 AL022326.1-202ENST00000641533 845 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 AL139011.1-202ENST00000642063 584 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.13□□□□□ -0.31
TOMM40O96008 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 AC105917.1-201ENST00000506637 2539 ntBASIC13.13□□□□□ -0.31
TOMM40O96008 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TOMM40O96008 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TOMM40O96008 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.13□□□□□ -0.31
TOMM40O96008 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.12□□□□□ -0.31
TOMM40O96008 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.12□□□□□ -0.31
TOMM40O96008 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TOMM40O96008 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
TOMM40O96008 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.12□□□□□ -0.31
TOMM40O96008 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.12□□□□□ -0.31
TOMM40O96008 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 AL139288.1-201ENST00000623748 933 ntBASIC13.12□□□□□ -0.31
TOMM40O96008 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TOMM40O96008 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TOMM40O96008 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
TOMM40O96008 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.11□□□□□ -0.31
TOMM40O96008 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.11□□□□□ -0.31
TOMM40O96008 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TOMM40O96008 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TOMM40O96008 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.11□□□□□ -0.31
TOMM40O96008 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.11□□□□□ -0.31
TOMM40O96008 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.11□□□□□ -0.31
TOMM40O96008 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 AC006277.1-201ENST00000624348 1610 ntBASIC13.11□□□□□ -0.31
TOMM40O96008 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TOMM40O96008 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TOMM40O96008 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms