Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP3BO95985 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
TOP3BO95985 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
TOP3BO95985 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP3BO95985 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP3BO95985 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.15■□□□□ 0.34
TOP3BO95985 PRSS29P-201ENST00000440800 595 ntBASIC17.15■□□□□ 0.34
TOP3BO95985 AC136632.2-201ENST00000512891 861 ntBASIC17.15■□□□□ 0.34
TOP3BO95985 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.15■□□□□ 0.34
TOP3BO95985 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 AC006449.5-201ENST00000610658 2098 ntBASIC17.15■□□□□ 0.34
TOP3BO95985 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TOP3BO95985 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TOP3BO95985 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TOP3BO95985 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TOP3BO95985 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.14■□□□□ 0.34
TOP3BO95985 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TOP3BO95985 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 AL135999.2-201ENST00000622438 1686 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TOP3BO95985 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 MYCLP1-201ENST00000372451 1075 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TOP3BO95985 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 AC015922.1-201ENST00000421102 1152 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP3BO95985 AC069262.1-201ENST00000539058 672 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.14■□□□□ 0.33
TOP3BO95985 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 PGM5P2-202ENST00000637225 1043 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 AL022326.1-202ENST00000641533 845 ntBASIC17.14■□□□□ 0.33
TOP3BO95985 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TOP3BO95985 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TOP3BO95985 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
TOP3BO95985 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TOP3BO95985 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TOP3BO95985 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 AC132872.4-202ENST00000622924 2756 ntBASIC17.13■□□□□ 0.33
TOP3BO95985 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 PCDHB17P-201ENST00000539533 2393 ntBASIC17.13■□□□□ 0.33
TOP3BO95985 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
TOP3BO95985 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TOP3BO95985 GK-202ENST00000378941 458 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP3BO95985 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.13■□□□□ 0.33
TOP3BO95985 AC007274.1-201ENST00000439805 662 ntBASIC17.13■□□□□ 0.33
TOP3BO95985 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms