Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 AC079328.2-201ENST00000561241 3354 ntBASIC17.46■□□□□ 0.39
TRUB2O95900 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRUB2O95900 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
TRUB2O95900 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 BX842568.4-201ENST00000421222 227 ntBASIC17.46■□□□□ 0.39
TRUB2O95900 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.46■□□□□ 0.39
TRUB2O95900 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.46■□□□□ 0.39
TRUB2O95900 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.46■□□□□ 0.39
TRUB2O95900 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.46■□□□□ 0.39
TRUB2O95900 MTDHP5-201ENST00000598980 586 ntBASIC17.46■□□□□ 0.39
TRUB2O95900 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.46■□□□□ 0.39
TRUB2O95900 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
TRUB2O95900 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.46■□□□□ 0.39
TRUB2O95900 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRUB2O95900 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.46■□□□□ 0.38
TRUB2O95900 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRUB2O95900 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRUB2O95900 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRUB2O95900 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 AL662844.4-201ENST00000606367 2838 ntBASIC17.45■□□□□ 0.38
TRUB2O95900 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRUB2O95900 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRUB2O95900 RNU1-129P-201ENST00000384064 167 ntBASIC17.45■□□□□ 0.38
TRUB2O95900 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.45■□□□□ 0.38
TRUB2O95900 AC140658.5-201ENST00000438532 169 ntBASIC17.45■□□□□ 0.38
TRUB2O95900 U1.21-201ENST00000580816 167 ntBASIC17.45■□□□□ 0.38
TRUB2O95900 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRUB2O95900 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.45■□□□□ 0.38
TRUB2O95900 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRUB2O95900 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.45■□□□□ 0.38
TRUB2O95900 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRUB2O95900 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.44■□□□□ 0.38
TRUB2O95900 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.44■□□□□ 0.38
TRUB2O95900 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.44■□□□□ 0.38
TRUB2O95900 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.44■□□□□ 0.38
TRUB2O95900 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRUB2O95900 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.44■□□□□ 0.38
TRUB2O95900 AP002472.1-201ENST00000577490 586 ntBASIC17.44■□□□□ 0.38
TRUB2O95900 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.44■□□□□ 0.38
TRUB2O95900 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.44■□□□□ 0.38
TRUB2O95900 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRUB2O95900 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRUB2O95900 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms