Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CNOT4O95628 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.86□□□□□ -0.03
CNOT4O95628 AC140658.5-201ENST00000438532 169 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.86□□□□□ -0.03
CNOT4O95628 CYMP-203ENST00000474680 1263 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.86□□□□□ -0.03
CNOT4O95628 YBX1P5-201ENST00000509441 847 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 AC112191.1-201ENST00000523689 701 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 MIR4469-201ENST00000583919 79 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.86□□□□□ -0.03
CNOT4O95628 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CNOT4O95628 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CNOT4O95628 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 AC141586.5-201ENST00000624546 2050 ntBASIC14.86□□□□□ -0.03
CNOT4O95628 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CNOT4O95628 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CNOT4O95628 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CNOT4O95628 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.86□□□□□ -0.03
CNOT4O95628 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CNOT4O95628 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 PP12613-201ENST00000424958 2230 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.85□□□□□ -0.03
CNOT4O95628 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 AC002056.1-201ENST00000395613 760 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 AC254562.1-201ENST00000417586 456 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 RFPL4AP1-201ENST00000530883 850 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 AC131009.4-201ENST00000624048 1740 ntBASIC14.85□□□□□ -0.03
CNOT4O95628 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CNOT4O95628 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CNOT4O95628 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CNOT4O95628 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 AC108860.2-201ENST00000562760 2183 ntBASIC14.84□□□□□ -0.03
CNOT4O95628 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms