Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 SPDYE11-202ENST00000450699 704 ntBASIC17.6■□□□□ 0.41
RTN3O95197 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.6■□□□□ 0.41
RTN3O95197 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.6■□□□□ 0.41
RTN3O95197 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 SPDYE9P-201ENST00000570642 692 ntBASIC17.6■□□□□ 0.41
RTN3O95197 SPDYE10P-202ENST00000612005 668 ntBASIC17.6■□□□□ 0.41
RTN3O95197 SPDYE8P-202ENST00000612377 668 ntBASIC17.6■□□□□ 0.41
RTN3O95197 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN3O95197 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RTN3O95197 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
RTN3O95197 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.6■□□□□ 0.41
RTN3O95197 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTN3O95197 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 LINC00554-201ENST00000564841 3011 ntBASIC17.59■□□□□ 0.41
RTN3O95197 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RTN3O95197 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.59■□□□□ 0.41
RTN3O95197 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN3O95197 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 TFAMP1-201ENST00000412727 736 ntBASIC17.59■□□□□ 0.41
RTN3O95197 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 TIMM8BP1-201ENST00000452384 211 ntBASIC17.59■□□□□ 0.41
RTN3O95197 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN3O95197 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.59■□□□□ 0.41
RTN3O95197 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 AC022145.2-201ENST00000598203 171 ntBASIC17.59■□□□□ 0.41
RTN3O95197 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.59■□□□□ 0.41
RTN3O95197 AC021097.1-201ENST00000607902 574 ntBASIC17.59■□□□□ 0.41
RTN3O95197 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.59■□□□□ 0.41
RTN3O95197 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTN3O95197 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTN3O95197 AC006277.1-201ENST00000624348 1610 ntBASIC17.58■□□□□ 0.41
RTN3O95197 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.58■□□□□ 0.41
RTN3O95197 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTN3O95197 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTN3O95197 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 AC004461.1-201ENST00000412461 403 ntBASIC17.58■□□□□ 0.4
RTN3O95197 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN3O95197 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.58■□□□□ 0.4
RTN3O95197 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RTN3O95197 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTN3O95197 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.58■□□□□ 0.4
RTN3O95197 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN3O95197 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.58■□□□□ 0.4
RTN3O95197 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
RTN3O95197 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTN3O95197 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTN3O95197 LINC00895-201ENST00000629028 1637 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms