Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PFDN1O60925 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PFDN1O60925 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.9□□□□□ -0.02
PFDN1O60925 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PFDN1O60925 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.9□□□□□ -0.02
PFDN1O60925 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.9□□□□□ -0.02
PFDN1O60925 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.9□□□□□ -0.02
PFDN1O60925 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.9□□□□□ -0.02
PFDN1O60925 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 TERF1P2-201ENST00000583350 1212 ntBASIC14.9□□□□□ -0.02
PFDN1O60925 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.9□□□□□ -0.02
PFDN1O60925 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.9□□□□□ -0.02
PFDN1O60925 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.9□□□□□ -0.02
PFDN1O60925 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 LINC01311-201ENST00000565162 1445 ntBASIC14.9□□□□□ -0.02
PFDN1O60925 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 AC022898.2-201ENST00000616822 1312 ntBASIC14.9□□□□□ -0.02
PFDN1O60925 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.9□□□□□ -0.02
PFDN1O60925 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PFDN1O60925 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PFDN1O60925 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.89□□□□□ -0.03
PFDN1O60925 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.89□□□□□ -0.03
PFDN1O60925 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.89□□□□□ -0.03
PFDN1O60925 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 PEG13-201ENST00000631594 5667 ntBASIC14.89□□□□□ -0.03
PFDN1O60925 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PFDN1O60925 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PFDN1O60925 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.89□□□□□ -0.03
PFDN1O60925 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PFDN1O60925 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.88□□□□□ -0.03
PFDN1O60925 RASA4CP-201ENST00000424092 1398 ntBASIC14.88□□□□□ -0.03
PFDN1O60925 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PFDN1O60925 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms