Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.04■□□□□ 0.16
PRAMEF4O60810 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.04■□□□□ 0.16
PRAMEF4O60810 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PRAMEF4O60810 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRAMEF4O60810 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 AC026396.1-201ENST00000419388 421 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 AL590627.1-203ENST00000421194 1026 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 AC007967.2-201ENST00000432613 625 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 AC064836.3-201ENST00000607928 673 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF4O60810 LINC02199-201ENST00000506655 2702 ntBASIC16.03■□□□□ 0.16
PRAMEF4O60810 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF4O60810 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF4O60810 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 PCGF3-213ENST00000620529 1899 ntBASIC16.02■□□□□ 0.16
PRAMEF4O60810 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 AL031432.2-201ENST00000566714 459 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms