Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH7O60245 AC005412.3-201ENST00000580309 715 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 CYP2A7P1-201ENST00000595391 815 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH7O60245 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 GGT3P-204ENST00000453783 1664 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 AC005052.1-201ENST00000625181 2492 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
PCDH7O60245 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCDH7O60245 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 AL512652.2-201ENST00000625156 1716 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDH7O60245 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
PCDH7O60245 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH7O60245 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH7O60245 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH7O60245 AC087641.1-201ENST00000557561 1021 ntBASIC15.96■□□□□ 0.15
PCDH7O60245 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 AL031008.1-201ENST00000619963 541 ntBASIC15.96■□□□□ 0.15
PCDH7O60245 AP001350.2-201ENST00000625104 1094 ntBASIC15.96■□□□□ 0.15
PCDH7O60245 FAM215A-202ENST00000632077 792 ntBASIC15.96■□□□□ 0.15
PCDH7O60245 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH7O60245 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH7O60245 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH7O60245 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH7O60245 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH7O60245 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH7O60245 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDH7O60245 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PCDH7O60245 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH7O60245 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDH7O60245 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH7O60245 MRPL20P1-201ENST00000400819 433 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 FAAHP1-202ENST00000446499 1238 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 AC108073.2-201ENST00000464002 357 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms