Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.56□□□□□ -0.08
SYNGR3O43761 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SYNGR3O43761 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SYNGR3O43761 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SYNGR3O43761 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.55□□□□□ -0.08
SYNGR3O43761 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 YBX2P1-201ENST00000394192 760 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 AL513480.1-201ENST00000451731 511 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.55□□□□□ -0.08
SYNGR3O43761 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 AC018845.2-201ENST00000568326 409 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 AC006538.3-201ENST00000612495 578 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 AC010507.1-201ENST00000633895 436 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 AL645728.2-201ENST00000641974 660 ntBASIC14.55□□□□□ -0.08
SYNGR3O43761 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.55□□□□□ -0.08
SYNGR3O43761 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.55□□□□□ -0.08
SYNGR3O43761 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.55□□□□□ -0.08
SYNGR3O43761 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.55□□□□□ -0.08
SYNGR3O43761 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.55□□□□□ -0.08
SYNGR3O43761 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.55□□□□□ -0.08
SYNGR3O43761 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SYNGR3O43761 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.55□□□□□ -0.08
SYNGR3O43761 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SYNGR3O43761 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AC006449.5-201ENST00000610658 2098 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 HMGA1P7-201ENST00000406908 502 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 MIR1233-2-201ENST00000408138 82 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 MIR1233-1-201ENST00000408722 82 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 RHOQP3-201ENST00000437982 621 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.54□□□□□ -0.08
SYNGR3O43761 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.54□□□□□ -0.08
SYNGR3O43761 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AC023141.13-201ENST00000604991 943 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 GPAA1P2-202ENST00000606848 1787 ntBASIC14.54□□□□□ -0.08
SYNGR3O43761 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.54□□□□□ -0.08
SYNGR3O43761 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SYNGR3O43761 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SYNGR3O43761 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms