Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 AC254562.1-201ENST00000417586 456 ntBASIC17.31■□□□□ 0.36
MSI1O43347 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.31■□□□□ 0.36
MSI1O43347 SPDYE11-202ENST00000450699 704 ntBASIC17.31■□□□□ 0.36
MSI1O43347 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.31■□□□□ 0.36
MSI1O43347 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
MSI1O43347 SPDYE9P-201ENST00000570642 692 ntBASIC17.31■□□□□ 0.36
MSI1O43347 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.31■□□□□ 0.36
MSI1O43347 AC021097.1-201ENST00000607902 574 ntBASIC17.31■□□□□ 0.36
MSI1O43347 SPDYE10P-202ENST00000612005 668 ntBASIC17.31■□□□□ 0.36
MSI1O43347 SPDYE8P-202ENST00000612377 668 ntBASIC17.31■□□□□ 0.36
MSI1O43347 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
MSI1O43347 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 WASH6P-202ENST00000359512 1437 ntBASIC17.3■□□□□ 0.36
MSI1O43347 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MSI1O43347 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.3■□□□□ 0.36
MSI1O43347 AC079140.1-201ENST00000508039 487 ntBASIC17.3■□□□□ 0.36
MSI1O43347 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.3■□□□□ 0.36
MSI1O43347 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.3■□□□□ 0.36
MSI1O43347 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 AC243562.1-201ENST00000560672 389 ntBASIC17.3■□□□□ 0.36
MSI1O43347 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
MSI1O43347 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MSI1O43347 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 AC027612.4-201ENST00000605371 583 ntBASIC17.3■□□□□ 0.36
MSI1O43347 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 AC079781.4-201ENST00000641908 219 ntBASIC17.3■□□□□ 0.36
MSI1O43347 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MSI1O43347 HLA-A-202ENST00000376806 1854 ntBASIC17.3■□□□□ 0.36
MSI1O43347 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MSI1O43347 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
MSI1O43347 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MSI1O43347 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MSI1O43347 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
MSI1O43347 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MSI1O43347 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 AGGF1P2-201ENST00000426656 2106 ntBASIC17.29■□□□□ 0.36
MSI1O43347 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 AC079328.2-201ENST00000561241 3354 ntBASIC17.29■□□□□ 0.36
MSI1O43347 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 AP000344.2-201ENST00000512987 629 ntBASIC17.29■□□□□ 0.36
MSI1O43347 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 AL139011.1-202ENST00000642063 584 ntBASIC17.29■□□□□ 0.36
MSI1O43347 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms