Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 TOP3BP1-201ENST00000420768 1380 ntBASIC15.12■□□□□ 0.01
SURF4O15260 AC002310.6-201ENST00000624451 1377 ntBASIC15.12■□□□□ 0.01
SURF4O15260 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.12■□□□□ 0.01
SURF4O15260 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.12■□□□□ 0.01
SURF4O15260 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.12■□□□□ 0.01
SURF4O15260 AC099336.1-202ENST00000602961 463 ntBASIC15.12■□□□□ 0.01
SURF4O15260 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.12■□□□□ 0.01
SURF4O15260 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
SURF4O15260 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.12■□□□□ 0.01
SURF4O15260 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.12■□□□□ 0.01
SURF4O15260 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SURF4O15260 GGT4P-201ENST00000623672 1708 ntBASIC15.12■□□□□ 0.01
SURF4O15260 AL512652.2-201ENST00000625156 1716 ntBASIC15.12■□□□□ 0.01
SURF4O15260 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.11■□□□□ 0.01
SURF4O15260 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.11■□□□□ 0.01
SURF4O15260 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 KRT16P4-201ENST00000453883 522 ntBASIC15.11■□□□□ 0.01
SURF4O15260 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
SURF4O15260 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SURF4O15260 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SURF4O15260 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SURF4O15260 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SURF4O15260 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.1■□□□□ 0.01
SURF4O15260 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.1■□□□□ 0.01
SURF4O15260 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SURF4O15260 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SURF4O15260 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SURF4O15260 AC006449.6-201ENST00000612330 2296 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms