Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
RTL8CO15255 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 AC087499.5-201ENST00000452760 1342 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 AL035456.1-201ENST00000456064 1369 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RTL8CO15255 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
RTL8CO15255 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.07□□□□□ -0.64
RTL8CO15255 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 INE1-201ENST00000456273 945 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.07□□□□□ -0.64
RTL8CO15255 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.07□□□□□ -0.64
RTL8CO15255 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.07□□□□□ -0.64
RTL8CO15255 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.07□□□□□ -0.64
RTL8CO15255 MPDU1-223ENST00000582151 728 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.07□□□□□ -0.64
RTL8CO15255 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RTL8CO15255 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 AC004840.1-201ENST00000636359 365 ntBASIC11.07□□□□□ -0.64
RTL8CO15255 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.07□□□□□ -0.64
RTL8CO15255 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.07□□□□□ -0.64
RTL8CO15255 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTL8CO15255 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.06□□□□□ -0.64
RTL8CO15255 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RTL8CO15255 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.06□□□□□ -0.64
RTL8CO15255 FOXO1B-201ENST00000504678 1527 ntBASIC11.06□□□□□ -0.64
RTL8CO15255 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 AC008764.6-201ENST00000595909 2069 ntBASIC11.06□□□□□ -0.64
RTL8CO15255 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.06□□□□□ -0.64
RTL8CO15255 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTL8CO15255 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.06□□□□□ -0.64
RTL8CO15255 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RTL8CO15255 HLA-H-201ENST00000383620 1096 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms