Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TSPAN4O14817 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TSPAN4O14817 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TSPAN4O14817 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.13□□□□□ -0.15
TSPAN4O14817 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.12□□□□□ -0.15
TSPAN4O14817 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TSPAN4O14817 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
TSPAN4O14817 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 AC133963.1-201ENST00000504166 1679 ntBASIC14.12□□□□□ -0.15
TSPAN4O14817 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.12□□□□□ -0.15
TSPAN4O14817 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 INGX-201ENST00000359239 846 ntBASIC14.12□□□□□ -0.15
TSPAN4O14817 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 SLC25A3P1-201ENST00000443844 931 ntBASIC14.12□□□□□ -0.15
TSPAN4O14817 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 AC068587.9-201ENST00000641814 219 ntBASIC14.12□□□□□ -0.15
TSPAN4O14817 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.12□□□□□ -0.15
TSPAN4O14817 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.12□□□□□ -0.15
TSPAN4O14817 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.12□□□□□ -0.15
TSPAN4O14817 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TSPAN4O14817 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TSPAN4O14817 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TSPAN4O14817 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 AC013268.4-201ENST00000637413 2228 ntBASIC14.11□□□□□ -0.15
TSPAN4O14817 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 KRT8P45-201ENST00000414328 1447 ntBASIC14.11□□□□□ -0.15
TSPAN4O14817 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 ECEL1P3-201ENST00000427961 737 ntBASIC14.11□□□□□ -0.15
TSPAN4O14817 LIN28AP1-201ENST00000429574 405 ntBASIC14.11□□□□□ -0.15
TSPAN4O14817 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 MIR3180-5-201ENST00000583743 153 ntBASIC14.11□□□□□ -0.15
TSPAN4O14817 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TSPAN4O14817 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.11□□□□□ -0.15
TSPAN4O14817 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.11□□□□□ -0.15
TSPAN4O14817 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TSPAN4O14817 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TSPAN4O14817 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TSPAN4O14817 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TSPAN4O14817 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms