Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.97■□□□□ 0.15
PDLIM1O00151 TSSC2-201ENST00000450217 709 ntBASIC15.97■□□□□ 0.15
PDLIM1O00151 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 FRMD8P1-201ENST00000440433 1524 ntBASIC15.97■□□□□ 0.15
PDLIM1O00151 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 AC096633.1-201ENST00000422446 749 ntBASIC15.96■□□□□ 0.15
PDLIM1O00151 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 CHCHD2P8-201ENST00000429873 447 ntBASIC15.96■□□□□ 0.15
PDLIM1O00151 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 AP002383.4-201ENST00000442518 975 ntBASIC15.96■□□□□ 0.15
PDLIM1O00151 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
PDLIM1O00151 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.96■□□□□ 0.15
PDLIM1O00151 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM1O00151 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM1O00151 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDLIM1O00151 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM1O00151 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM1O00151 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM1O00151 SNX18-202ENST00000343017 3140 ntBASIC15.96■□□□□ 0.14
PDLIM1O00151 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PDLIM1O00151 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.96■□□□□ 0.14
PDLIM1O00151 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM1O00151 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.96■□□□□ 0.14
PDLIM1O00151 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDLIM1O00151 AC010460.3-201ENST00000511359 1579 ntBASIC15.96■□□□□ 0.14
PDLIM1O00151 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PDLIM1O00151 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PDLIM1O00151 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.95■□□□□ 0.14
PDLIM1O00151 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.95■□□□□ 0.14
PDLIM1O00151 RN7SL606P-201ENST00000472779 293 ntBASIC15.95■□□□□ 0.14
PDLIM1O00151 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.95■□□□□ 0.14
PDLIM1O00151 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.95■□□□□ 0.14
PDLIM1O00151 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDLIM1O00151 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.95■□□□□ 0.14
PDLIM1O00151 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.95■□□□□ 0.14
PDLIM1O00151 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms