Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NACAE9PAV3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.3□□□□□ -0.44
NACAE9PAV3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NACAE9PAV3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.3□□□□□ -0.44
NACAE9PAV3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.3□□□□□ -0.44
NACAE9PAV3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.3□□□□□ -0.44
NACAE9PAV3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NACAE9PAV3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.3□□□□□ -0.44
NACAE9PAV3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NACAE9PAV3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NACAE9PAV3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NACAE9PAV3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NACAE9PAV3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 AC018695.7-201ENST00000624587 2492 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 SLC25A1P1-201ENST00000528351 927 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NACAE9PAV3 SART3-203ENST00000546611 1184 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 AL591684.3-201ENST00000605187 298 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 BX640515.1-201ENST00000617215 977 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 PCDHA14-201ENST00000506751 2298 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
NACAE9PAV3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
NACAE9PAV3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NACAE9PAV3 AC046158.3-201ENST00000624947 2558 ntBASIC12.29□□□□□ -0.44
NACAE9PAV3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NACAE9PAV3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.28□□□□□ -0.44
NACAE9PAV3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 ABCD1P5-201ENST00000445663 754 ntBASIC12.28□□□□□ -0.44
NACAE9PAV3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.28□□□□□ -0.44
NACAE9PAV3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NACAE9PAV3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.28□□□□□ -0.44
NACAE9PAV3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.28□□□□□ -0.44
NACAE9PAV3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NACAE9PAV3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.28□□□□□ -0.44
NACAE9PAV3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NACAE9PAV3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms