Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP17L11C9JVI0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP17L11C9JVI0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.26■□□□□ 0.67
USP17L11C9JVI0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 PRYP6-201ENST00000514804 343 ntBASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC012645.4-201ENST00000610691 1061 ntBASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 AC080080.1-201ENST00000625121 2420 ntBASIC19.26■□□□□ 0.67
USP17L11C9JVI0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L11C9JVI0 TUBB8P12-201ENST00000308911 1335 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TUBB7P-202ENST00000428444 1305 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TUBB8P7-204ENST00000567960 1332 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 MRPS18AP1-201ENST00000414458 589 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TSSK5P-201ENST00000423978 907 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 FOXO1B-201ENST00000504678 1527 ntBASIC19.25■□□□□ 0.67
USP17L11C9JVI0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L11C9JVI0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.24■□□□□ 0.67
USP17L11C9JVI0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L11C9JVI0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms