Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL359711.2-201ENST00000563105 872 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 SPCS2P2-201ENST00000603270 608 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 AC008687.7-202ENST00000637404 953 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 AC005077.2-201ENST00000449786 690 ntBASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 AL391069.4-201ENST00000609583 481 ntBASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM88BA6NKF7 AC138028.6-201ENST00000616106 1482 ntBASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM88BA6NKF7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.08■□□□□ 0.65
TMEM88BA6NKF7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM88BA6NKF7 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.08■□□□□ 0.65
TMEM88BA6NKF7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TMEM88BA6NKF7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 SCARNA20.5-201ENST00000516991 142 ntBASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 MIR5572-201ENST00000583188 137 ntBASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM88BA6NKF7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM88BA6NKF7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms