Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ZNF444P1-201ENST00000559497 298 ntBASIC11.78□□□□□ -0.52
LINC01546A6NGU7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 TERC-201ENST00000602385 541 ntBASIC11.78□□□□□ -0.52
LINC01546A6NGU7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01546A6NGU7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LINC01546A6NGU7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01546A6NGU7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01546A6NGU7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms