Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 GGT4P-201ENST00000623672 1708 ntBASIC14.56□□□□□ -0.08
MBD3L3A6NE82 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC236430.1-201ENST00000402231 743 ntBASIC14.56□□□□□ -0.08
MBD3L3A6NE82 TSSK5P-201ENST00000423978 907 ntBASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC024267.1-201ENST00000582320 895 ntBASIC14.56□□□□□ -0.08
MBD3L3A6NE82 RN7SL204P-201ENST00000582831 262 ntBASIC14.56□□□□□ -0.08
MBD3L3A6NE82 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 MIR661-201ENST00000384842 89 ntBASIC14.55□□□□□ -0.08
MBD3L3A6NE82 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 AC105021.1-202ENST00000570572 669 ntBASIC14.55□□□□□ -0.08
MBD3L3A6NE82 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.55□□□□□ -0.08
MBD3L3A6NE82 RN7SL828P-201ENST00000607615 303 ntBASIC14.55□□□□□ -0.08
MBD3L3A6NE82 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MBD3L3A6NE82 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AL603756.1-201ENST00000606511 2163 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CETN4P-206ENST00000642099 2168 ntBASIC14.54□□□□□ -0.08
MBD3L3A6NE82 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MBD3L3A6NE82 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms