Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV5A0A0B4J249 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 PMPCAP1-201ENST00000508114 1576 ntBASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 AC004817.3-201ENST00000602957 2129 ntBASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 VENTXP7-201ENST00000475503 772 ntBASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV5A0A0B4J249 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 AC006277.1-201ENST00000624348 1610 ntBASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV5A0A0B4J249 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AP002414.1-201ENST00000391405 1147 ntBASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AL020989.1-201ENST00000422979 469 ntBASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AC022616.7-201ENST00000525383 220 ntBASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 KRT8P49-201ENST00000604166 1432 ntBASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
TRAV5A0A0B4J249 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms