Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM56-RWDD3S4R434 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM56-RWDD3S4R434 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TMEM56-RWDD3S4R434 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM56-RWDD3S4R434 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 LINC01971-201ENST00000617888 1048 ntBASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 AC068473.5-201ENST00000616428 2072 ntBASIC19.44■□□□□ 0.7
TMEM56-RWDD3S4R434 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L13-201ENST00000554103 1267 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L15-201ENST00000611059 1267 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L23-201ENST00000615195 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L24-201ENST00000617576 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L22-201ENST00000618238 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L20-201ENST00000619712 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L21-201ENST00000622058 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L10-201ENST00000622460 1267 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 DUX4L25-201ENST00000624915 1269 ntBASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM56-RWDD3S4R434 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM56-RWDD3S4R434 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM56-RWDD3S4R434 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM56-RWDD3S4R434 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms