Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC01558Q9Y6Z2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01558Q9Y6Z2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01558Q9Y6Z2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01558Q9Y6Z2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01558Q9Y6Z2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 AP004833.2-201ENST00000532228 1454 ntBASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01558Q9Y6Z2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 AC007375.3-201ENST00000600936 2314 ntBASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01558Q9Y6Z2 DUSP8P3-201ENST00000399571 1760 ntBASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 AC127496.7-201ENST00000625110 1798 ntBASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01558Q9Y6Z2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 AC096887.2-201ENST00000623443 1957 ntBASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01558Q9Y6Z2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms