Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF11Q9Y3C5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF11Q9Y3C5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF11Q9Y3C5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF11Q9Y3C5 MIR3960-201ENST00000583311 91 ntBASIC23.23■■□□□ 1.31
RNF11Q9Y3C5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF11Q9Y3C5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 ECEL1P2-201ENST00000461596 1295 ntBASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RNF11Q9Y3C5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF11Q9Y3C5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF11Q9Y3C5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF11Q9Y3C5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF11Q9Y3C5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF11Q9Y3C5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF11Q9Y3C5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF11Q9Y3C5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 AC022211.4-201ENST00000625094 2161 ntBASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF11Q9Y3C5 GPX1-201ENST00000419349 1106 ntBASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF11Q9Y3C5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF11Q9Y3C5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 AC097639.1-201ENST00000565519 1891 ntBASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 RP9P-202ENST00000450133 1212 ntBASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF11Q9Y3C5 AC142381.3-201ENST00000568208 1670 ntBASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF11Q9Y3C5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 AC093536.1-201ENST00000569153 554 ntBASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF11Q9Y3C5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RNF11Q9Y3C5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF11Q9Y3C5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF11Q9Y3C5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF11Q9Y3C5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF11Q9Y3C5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms