Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MIR3648-2-201ENST00000581792 180 ntBASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 MIR3648-1-201ENST00000615959 180 ntBASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CPSF2Q9P2I0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.8■■□□□ 1.4
CPSF2Q9P2I0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF2Q9P2I0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CPSF2Q9P2I0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF2Q9P2I0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 AC138932.3-201ENST00000567634 1902 ntBASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPSF2Q9P2I0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.78■■□□□ 1.4
CPSF2Q9P2I0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 AC016575.1-201ENST00000607026 382 ntBASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.77■■□□□ 1.4
CPSF2Q9P2I0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF2Q9P2I0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 AC126177.7-201ENST00000547904 679 ntBASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF2Q9P2I0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.74■■□□□ 1.39
CPSF2Q9P2I0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF2Q9P2I0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF2Q9P2I0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.71■■□□□ 1.39
CPSF2Q9P2I0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPSF2Q9P2I0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.7■■□□□ 1.38
CPSF2Q9P2I0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF2Q9P2I0 AC133561.1-201ENST00000568600 2415 ntBASIC23.7■■□□□ 1.38
CPSF2Q9P2I0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPSF2Q9P2I0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms