Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMEM39AQ9NV64 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM39AQ9NV64 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM39AQ9NV64 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMEM39AQ9NV64 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
TMEM39AQ9NV64 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.48■■□□□ 1.83
TMEM39AQ9NV64 AL449106.1-201ENST00000608517 1980 ntBASIC26.47■■□□□ 1.83
TMEM39AQ9NV64 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM39AQ9NV64 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
TMEM39AQ9NV64 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
TMEM39AQ9NV64 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM39AQ9NV64 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 MIR4466-201ENST00000606121 54 ntBASIC26.46■■□□□ 1.83
TMEM39AQ9NV64 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
TMEM39AQ9NV64 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.45■■□□□ 1.82
TMEM39AQ9NV64 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TMEM39AQ9NV64 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.45■■□□□ 1.82
TMEM39AQ9NV64 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.45■■□□□ 1.82
TMEM39AQ9NV64 AC133561.4-201ENST00000566112 224 ntBASIC26.44■■□□□ 1.82
TMEM39AQ9NV64 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.44■■□□□ 1.82
TMEM39AQ9NV64 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
TMEM39AQ9NV64 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM39AQ9NV64 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TMEM39AQ9NV64 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.43■■□□□ 1.82
TMEM39AQ9NV64 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM39AQ9NV64 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
TMEM39AQ9NV64 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM39AQ9NV64 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TMEM39AQ9NV64 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.4■■□□□ 1.82
TMEM39AQ9NV64 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.4■■□□□ 1.82
TMEM39AQ9NV64 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
TMEM39AQ9NV64 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.4■■□□□ 1.82
TMEM39AQ9NV64 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TMEM39AQ9NV64 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM39AQ9NV64 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TMEM39AQ9NV64 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.39■■□□□ 1.82
TMEM39AQ9NV64 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.39■■□□□ 1.82
TMEM39AQ9NV64 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.39■■□□□ 1.82
TMEM39AQ9NV64 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TMEM39AQ9NV64 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM39AQ9NV64 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.38■■□□□ 1.81
TMEM39AQ9NV64 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.38■■□□□ 1.81
TMEM39AQ9NV64 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.38■■□□□ 1.81
TMEM39AQ9NV64 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TMEM39AQ9NV64 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM39AQ9NV64 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.37■■□□□ 1.81
TMEM39AQ9NV64 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TMEM39AQ9NV64 AC092666.2-201ENST00000613287 246 ntBASIC26.37■■□□□ 1.81
TMEM39AQ9NV64 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.36■■□□□ 1.81
TMEM39AQ9NV64 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TMEM39AQ9NV64 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.35■■□□□ 1.81
TMEM39AQ9NV64 BX255925.1-201ENST00000566954 1854 ntBASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 AL512631.2-201ENST00000604634 923 ntBASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TMEM39AQ9NV64 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM39AQ9NV64 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
TMEM39AQ9NV64 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.33■■□□□ 1.81
TMEM39AQ9NV64 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMEM39AQ9NV64 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.33■■□□□ 1.81
TMEM39AQ9NV64 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.32■■□□□ 1.8
TMEM39AQ9NV64 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.32■■□□□ 1.8
TMEM39AQ9NV64 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMEM39AQ9NV64 ZNRF2P3-201ENST00000424200 374 ntBASIC26.32■■□□□ 1.8
TMEM39AQ9NV64 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMEM39AQ9NV64 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.31■■□□□ 1.8
TMEM39AQ9NV64 RARRES2P6-201ENST00000567333 442 ntBASIC26.31■■□□□ 1.8
TMEM39AQ9NV64 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
TMEM39AQ9NV64 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms