Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.46■■□□□ 1.99
RNF146Q9NTX7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
RNF146Q9NTX7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RNF146Q9NTX7 KRT18P24-201ENST00000344739 1156 ntBASIC27.45■■□□□ 1.98
RNF146Q9NTX7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RNF146Q9NTX7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.45■■□□□ 1.98
RNF146Q9NTX7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RNF146Q9NTX7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.45■■□□□ 1.98
RNF146Q9NTX7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 THA1P-201ENST00000590384 1145 ntBASIC27.44■■□□□ 1.98
RNF146Q9NTX7 AC131212.1-201ENST00000613771 668 ntBASIC27.44■■□□□ 1.98
RNF146Q9NTX7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.44■■□□□ 1.98
RNF146Q9NTX7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF146Q9NTX7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 AL356441.2-201ENST00000443009 864 ntBASIC27.42■■□□□ 1.98
RNF146Q9NTX7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
RNF146Q9NTX7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RNF146Q9NTX7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RNF146Q9NTX7 AC120024.1-201ENST00000562672 995 ntBASIC27.41■■□□□ 1.98
RNF146Q9NTX7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
RNF146Q9NTX7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RNF146Q9NTX7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.4■■□□□ 1.98
RNF146Q9NTX7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RNF146Q9NTX7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.4■■□□□ 1.98
RNF146Q9NTX7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
RNF146Q9NTX7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RNF146Q9NTX7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.39■■□□□ 1.98
RNF146Q9NTX7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RNF146Q9NTX7 BX664725.1-201ENST00000438252 379 ntBASIC27.39■■□□□ 1.98
RNF146Q9NTX7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.38■■□□□ 1.97
RNF146Q9NTX7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.38■■□□□ 1.97
RNF146Q9NTX7 AL592295.1-201ENST00000400984 884 ntBASIC27.37■■□□□ 1.97
RNF146Q9NTX7 KRT125P-201ENST00000546827 989 ntBASIC27.37■■□□□ 1.97
RNF146Q9NTX7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
RNF146Q9NTX7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF146Q9NTX7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF146Q9NTX7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.36■■□□□ 1.97
RNF146Q9NTX7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF146Q9NTX7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.36■■□□□ 1.97
RNF146Q9NTX7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF146Q9NTX7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
RNF146Q9NTX7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF146Q9NTX7 MIR4787-201ENST00000607364 84 ntBASIC27.35■■□□□ 1.97
RNF146Q9NTX7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
RNF146Q9NTX7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.34■■□□□ 1.97
RNF146Q9NTX7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF146Q9NTX7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RNF146Q9NTX7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RNF146Q9NTX7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.32■■□□□ 1.96
RNF146Q9NTX7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
RNF146Q9NTX7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RNF146Q9NTX7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 AC137630.3-201ENST00000607245 391 ntBASIC27.31■■□□□ 1.96
RNF146Q9NTX7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF146Q9NTX7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
RNF146Q9NTX7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.3■■□□□ 1.96
RNF146Q9NTX7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
RNF146Q9NTX7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.3■■□□□ 1.96
RNF146Q9NTX7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RNF146Q9NTX7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms